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From: christopher chin <chinchiquei@yahoo.com>
To : James W Bryson <brysonj@bms.com>
Date: Mon, 10 May 1999 09:43:32 -0700 (PDT)
Re: Compare fitting program for Ka
James,
You are absolutely correct. Thank you for pointing
out speed correction factor to me. After I made the
speed correction, there is no discrepancy between
Beckman and WinNonlin. Both give tetramer as the
likely model. Also the discrepancy between Beckman
and WinNonlin has dropped from 30% to 8-10%.
Best regards,
chris
--- James W Bryson <brysonj@bms.com> wrote:
> Chris,
>
> Here's one potential source for the difference you
> observed
> between Origin and WinNonLin in the 9-data set
> global fit:
> the speed factors you have quoted on at the end of
> the document
> "compare programs.doc" are incorrect. The speed
> factor is
> (speed_2/speed_1)^2, i.e. the square of the ratio of
> the speeds.
> Thus if you are defining 18krpm with speed factor =
> 1.0,
> then 20krpm would be (20/18)^2 = 1.23457, and 24krpm
> would
> be 1.77778. See if this helps. This may remove the
> discrepency
> in the dimer vs. trimer vs. tetramer problem as well
> if you calculated
> the speed factors similarly for the WinNonLin fits.
> I hope this helps.
>
> Best Regards,
> -Jim
>
> ________________________
> James W. Bryson.
> Bristol-Myers Squibb Co.
> BrysonJ@BMS.com
> 609-252-5467
>
>
>
>
>
>
>
===
-------------------------------------
Christopher Chin
Manager
Sealy Center for Structural Biology
HBC&G, 5136 MRB. rt1055 UTMB
cchin@utmb.edu, 409-772-1693, efax 708-585-1920
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