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From: Prof.Dr.M.D.Lechner <lechner@rz.Uni-Osnabrueck.DE>
To : rasmb@bbri.harvard.edu
Date: Thu, 29 Feb 1996 11:07:08 +0100
Calculation of Mn, Mw, Mz, molar mass distribution
To: T. Aerts, Dept. of Biochemistry, University of Antwerp
To: All XLA users
in his message from 23. Feb 1996 T. Aerts states that for calculating Mz
one has to calculate the weight average molar masses and the
concentrations
at the bottom Mw,b and Cb and at the meniscus Mw,m and Cm of the cell:
Mz = (Mwb Cb - Mwm Cm)/(Cb - Cm)
Mw(r) = (1/L)[d ln C/d(r^2)]
L = [(1 - v2 rho1) omega^2]/(2 R T) ; r = distance from center
of rotation
The determination of Mz requires the extrapolation of the experimental
obtained concentration C(r) as a function of r to the bottom and to the
meniscus; the concentration C(r) may be calculated in the cases of
absorption optics, interference optics and schlieren optics with the
usual
equations.
The extrapolation of C(r) = f(r) to the meniscus and to the bottom is
done
by a special regression spline procedure. The method has been tested with
many systems. The results for Mz are satisfactory if the measurements are
within distinct experimental errors. Additionally you can calculate Mn if
you have a meniscus depletion run (see H. Fujita, Foundations in
Ultracentrifugal Analysis).
We have developed the programs „XLASE“ (absorption optics) and
„EQUIL“
(interference optics, schlieren optics) for calculation of Mn, Mw, and
Mz.
The program „XLASE“ processes directly the XLA - files. If you are
interested, I can send you the programs on a diskette together with a
complete documentation. Another possibility is that you send me your XLA
-
files; the evaluation is then done by us and send to you. We are very
much
interested in measurments on (bio)polymers with relatively broad molar
mass
distributions.
Additionally to the above described procedure it would be possible to
determine the molar mass distribution of (bio)polymers including Mn, Mw,
and Mz. The method is based on inverse transformation or optimization
procedures. (see H. Fujita, Foundations in Ultracentrifugal Analysis;
M.D.Lechner, W.Mächtle, Makromol.Chem.,Rapid.Commun. 13(1992)555). This
method has also been tested with many systems. Our feeling is that this
method is slightly better than the extrapolation procedure. The reason
may
be, that you don’t need the error producing determination of the
slopes at
the meniscus and at the bottom of the C(r) curves of the cell.
We have developed the program „DIRECT“ (absorption optics,
interference
optics, schlieren optics) for calculation of the molar mass distribution
and
Mn, Mw, and Mz. This program accepts directly the XLA - files. If you are
interested, I can send you this program together with a
complete documentation.
In case of any troubles or questions, I would kindly ask you to contact me.
M.D.Lechner
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